Cis-meQTLs across different cancer types

In cis-meQTL analysis, we identified 8,028,964 cis-meQTLs at FDR < 0.05 and |r|>=0.3 in 23 cancer types for users to search or browse.

 

e.g., "BLCA"
e.g., "rs11047888"
e.g., "cg25763538"
e.g., "KRAS"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Methylation probe
Methylation position (hg19)
Gene symbol
Beta
t-stat
r
P-valule
Display
BLCA rs885497 chr8:91681557 T/C cg16814680 chr8:91681699 NA -1.19 -36.28 -0.88 1.65E-125 Box Plot
BLCA rs9557248 chr13:100171925 G/A cg25919922 chr13:100150906 NA 1.17 32.82 0.86 5.92E-113 Box Plot
BLCA rs9726097 chr1:227185385 A/G cg10327440 chr1:227177885 CDC42BPA -1.14 -31.72 -0.85 7.63E-109 Box Plot
BLCA rs9727512 chr1:227185375 G/T cg10327440 chr1:227177885 CDC42BPA -1.14 -31.37 -0.85 1.6E-107 Box Plot